I'm on my second copy now. I've checked a TON of reviews and I'd say more than half have the same problem. The skips are never in the same place either...just at some point in BDTH you're going to skip. I've cleaned both copies, and the skips really do not seem to be in the same place. I'm now convinced that if I want to listen to BDTH and Naive Melody on vinyl then I'm going to have to listen to my copy of American Utopia (still fantastic but I'd still like the studio versions).
EDIT: I've gotten mine from my local record store and I think at some point I'm just going to live with it instead of being that guy that just returns records all the time. I think it's a pressing wide issue.